CDS

Accession Number TCMCG057C15002
gbkey CDS
Protein Id XP_018484069.1
Location complement(join(1376792..1376950,1377031..1377116,1377201..1377273,1377342..1377401,1377505..1377553,1377640..1377746,1377863..1377916,1378029..1378073,1378229..1378429,1378522..1378595,1378788..1378982,1379093..1380382,1380497..1380577,1380661..1380730,1380811..1381050))
Gene LOC108854888
GeneID 108854888
Organism Raphanus sativus

Protein

Length 927aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018628567.1
Definition PREDICTED: DNA mismatch repair protein MLH3-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein MLH3-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08739        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03430        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005712        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032300        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCTTCACGGTGACAGATATCAATTCAAGATTCATAAGCAAAGGTCCCATACACAAGCTACTGAACAACTTCGCTGCTAGTTTTGATTCTACGGATGACTGGAAGTCTACAGATGGGCTACAAACAGGACGACGTAGCAGACTTCAACACTGTCCTGGCTACATATTGTGCATAACATGTCCACGTCATCTTTATGAATTCTCGTTTGAACCCTCAAAGACAAACGTCGAGTTCAAGAACTGGGAACCTATACTTGCCTTCATAGAAAGAATCATTCTAGCCAAGTGGAAGAAAGATGAGGGTCTTGAAATTTGTGATGAGGGAGCTGATCTGCTGGCAAAAGGTGATAGACAAGACCTGATTGATGACATGGGTAGACTTCAAGAAGAGTGGCCAGAAACTATAGAACCTACAAAAAAGAAGCGCAAGAGAAGTAATGATCAGACACCTTGTAGTTTTCTCTTGTCCCCGTCTGGTGACTTTAGAAAAGATGATGGTTATTTTTCGCAAGGAAAGGAGGAATGGTCTCCAAAATATGAACAAAACACTGTAGCTGAATTTGACGGTCTGACTGCTTCTGTTCGACAGCCATGTGACATCGATATGCAAAAGAATGAAGACTTTCCACAAGTCACTGACCTCCTAGGAACAAGCTTGGTTTCTGGCGATAAGTGCAGCAAACAGTTTCTAACAAGATGCCAAACTAGCAAACCTCTCAATGTCTACAATGATTTTACAGAAGATACAGACGTATTAAATTTTCAGTTTGAAGAAGTTGACGACGAGTTAGATGCCAGCAATTACATTGGAAAGCATCTTTTGCGGGGTTGCTCCTCAAGAGAAAGCCTAGCCCTTCATGAGCCTAAACTATCTCATGGTGAATGGTCTGAATCAGGCATGAAACTTGATGACAAACGAACGAATTCACTGATTAATGTCGTAGAGACCGGAGAAGGTGATTCTTACTGTGATGTTCTTTCTGACACACTTGAATTTCATGGAATGACCAGGACTCCTGTTTGTTCCCTAGGGAGTTCATGGCAGGATACTGATTGGTTTAATCCACAACATTCCTTAGACAATCCAAGTGTTGGAATTGGAGAAGACTTTAACATCAACCCCGTAGATATTACGGAATTTCGTTCTTATGAAGACAGCTTTGTCAAGAAAAGGTACTCTTCCTCAGCCAATGTCGGGAGGTCTGGTAGTTACCGTCTGAGTTCTGAGTGCTCTACAGTGTTCTCCACATCTCCTACGGCCGAGTGGAAGTCTGATTACCAGAAAGGTTGTCAAATTCTTGAAGGGAGTTTGAACGTGGGAAGGATGCCTGACCCTGGATATTTTTTCAGTGAAGCTAACAACGTCAAATTTGATCATGAGGCCATACCTCAAATCGATTGCCGGAAAACCAGCACAGATTCTTTCGCAGATATTCGGAATTGCACCGAGTCAGGGGAAAAGATTTTCCAGTCATTGTGGGGGAATGCAGATAATGTGGGTATTGAACAACATAGTATCGGGAAGGACAAATTTAGTTATAGGTATGGGTCAAAAAAAAATGTTGGTGAACGAAGGTCAAGAAGAAGCCGCTCTGCTCCTCCATTTTATCAAGAGAAAAAGAGGTTTGTCAGTTTAAGTTGTAAAGCAGACACAAAATCGAAGAACTCTGATCCATCAGAACCTGATGATTTGGAGTGCTTGACACAACCCTGTAATACATCTCACATGCATCTTAACGACAGCATCCTTGATGATGTGTCATATGATCACCTTCAAGAACCAGGAAAAAGAATGAGTCCGGCCTCAGACTTGAAAGCATCTGCTGGTTGCAGTATTGTGCACTCAGAGACCCGAGATGAGGATGGAGACGAAGACTTCAGCTCAGAGGAAAATCTGGATCCAGTTAAATCCACAACGAAATGGCGCCATAACTGTCCGTCCCCTCAGGTTGCCAAGCAATCACACGAGCTTCATGATCAAGATAGTGTACTTGATATATGTTCAGGATTTTTGCACCTGCGATCCGATGAGTCCTTGGTTCCTGAATCTATAAACAGACACTCCCTTGAAGATGCCAAGGTTCTACAACAGGTGGATAAAAAATACATCCCAATTATTGCCTGTGGAACAGTTGCCATCGTTGATCAGCATGCTGCCGATGAAAGAATTCGCTTAGAAGAGCTGCGTAAAAAGGTCCTGGCTGGGGAAGCAAGGACAGTCACCCATTTGAGTGCAGACCAAGAGTTGGTCCTGCCAGAGATGGGTTATCAGTTACTCCAGAGTTATTCAGACCAGATAAGAGACTGGGGTTGGATCTGCAGCACTAATGCAGAAGGGTCAACGTCCTTTAAGAAGAGCATGAGCATCATTCAGCGGAAACCAACTCCAATCACACTCAATGCGGTCCCATGCATTCTGGGTGTAAATCTATCAGATGTTGATCTATTAGAGTTTCTTCAGCAGCTTGCTGATACTGACGGATCATCAACAATTCCTCCATCTGTTCTTCGAGTCCTGAACTCCAAAGCATGTAGAGGTGCAATTATGTTCGGAGATTCTCTGTTGCCCTCGGAATGCTCTTTAATCATCGATGGACTGAAGCAGACCTCACTGTGTTTCCAGTGTGCTCATGGGCGACCAACGACAGTTCCTCTAGTCAATTTGAAAGCATTACACAAACAGATAGCAAAGCTCGAACCAAGACAACCGTGGCATGGGTTCGAACGCAGAGAAATCACACTTGATCGTGCTAAGTCACGCTTAGATGAAGCTAGAAGCTAA
Protein:  
MAFTVTDINSRFISKGPIHKLLNNFAASFDSTDDWKSTDGLQTGRRSRLQHCPGYILCITCPRHLYEFSFEPSKTNVEFKNWEPILAFIERIILAKWKKDEGLEICDEGADLLAKGDRQDLIDDMGRLQEEWPETIEPTKKKRKRSNDQTPCSFLLSPSGDFRKDDGYFSQGKEEWSPKYEQNTVAEFDGLTASVRQPCDIDMQKNEDFPQVTDLLGTSLVSGDKCSKQFLTRCQTSKPLNVYNDFTEDTDVLNFQFEEVDDELDASNYIGKHLLRGCSSRESLALHEPKLSHGEWSESGMKLDDKRTNSLINVVETGEGDSYCDVLSDTLEFHGMTRTPVCSLGSSWQDTDWFNPQHSLDNPSVGIGEDFNINPVDITEFRSYEDSFVKKRYSSSANVGRSGSYRLSSECSTVFSTSPTAEWKSDYQKGCQILEGSLNVGRMPDPGYFFSEANNVKFDHEAIPQIDCRKTSTDSFADIRNCTESGEKIFQSLWGNADNVGIEQHSIGKDKFSYRYGSKKNVGERRSRRSRSAPPFYQEKKRFVSLSCKADTKSKNSDPSEPDDLECLTQPCNTSHMHLNDSILDDVSYDHLQEPGKRMSPASDLKASAGCSIVHSETRDEDGDEDFSSEENLDPVKSTTKWRHNCPSPQVAKQSHELHDQDSVLDICSGFLHLRSDESLVPESINRHSLEDAKVLQQVDKKYIPIIACGTVAIVDQHAADERIRLEELRKKVLAGEARTVTHLSADQELVLPEMGYQLLQSYSDQIRDWGWICSTNAEGSTSFKKSMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFLQQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSECSLIIDGLKQTSLCFQCAHGRPTTVPLVNLKALHKQIAKLEPRQPWHGFERREITLDRAKSRLDEARS